If the engine stop relay isn't getting switched via the kill switch the fuel pump relay won't switch either, nor will the ECU read a 'run' state at pin P2E1
Check the voltage at the stop relay. You should see it toggle with the kill switch. That relay then switches the fuel pump relay. The fuel pump relay in turn provides the voltage for both pump and ECU.
If you have TuneBoy or TuneECU handy you can force the fuel pump to run from the 'Tests' page